Biomedical Informatics

The positional footprinting web server, PEAKS, can be used to identify significant motif positional biases in DNA sequences. Developed by the Evolutionary Genomics group. The software identifies...
Pentacle is an advanced software tool for computing, handling and interpreting GRid INdependent Descriptors (GRIND). It was born as a replacement of the pioneering ALMOND software. All our experience...
Pyicos (PYICOTEO): a software tool for the analysis of ChIP-Seq and CLIP-Seq mapped reads
Add-on software package for the R statistical software to learn q-order partial graphs from multivariate normal data. Q-order partial correlation graphs, or qp-graphs for short, are undirected...
Advanced Scaffold Hopping and beyond.The final result of many computational tools and methods used in drug discovery is a mathematical model or a 3D graphic. However, drug design aims to obtain real...
SUPPA: a tool for the fast calculation of alternative splicing patterns and differential splicing across at event and transcript level across multiple conditions from RNA-Seq data
SVM-BPfinder: a tool for mammalian U2 branch point prediction developed by the Computational RNA Biology Group. The branch point (BP) is one of the three obligatory signals required for pre-mRNA...
YISD: A database with information on RNA secondary structure of introns in S. cerevisiae and other Saccharomyces species developed by the Computationsl RNA Biology Group. YISD is a computational...

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